isomiR-SEA: an RNA-Seq analysis tool for miRNAs/isomiRs expression level profiling and miRNA-mRNA interaction sites evaluation.
Gianvito UrgeseGiulia PacielloAndrea AcquavivaElisa FicarraPublished in: BMC Bioinform. (2016)
Keyphrases
- post transcriptional
- gene expression
- analysis tool
- genome wide
- expression profiles
- gene regulation
- rna seq
- microarray
- high throughput
- regulatory networks
- gene function
- gene expression profiles
- gene expression data
- computational methods
- gene sets
- secondary structure
- microarray data
- protein interaction
- transcription factors
- alternative splicing
- gene ontology
- biological processes
- systems biology
- gene regulatory networks
- binding sites
- protein protein interactions
- human genome
- gene networks
- data sets
- rna sequences
- biological systems
- genome sequences
- genomic data
- gene selection
- microarray datasets
- biological networks
- textual information
- sequence data