A Compressed Self-Index for Genomic Databases

Travis Gagie Juha Kärkkäinen Yakov Nekrich Simon J. Puglisi

Published in: CoRR (2011)

Keyphrases

genomic databases
approximate string matching
suffix array
sequence databases
data structure
data compression
databases
index structure
inverted file
inverted index
indexing method
database
protein sequences
indexing techniques
similarity measurement
data mining
b tree
indexing methods
association rules
data analysis