Probabilistic Inference of Biochemical Reactions in Microbial Communities from Metagenomic Sequences.
Dazhi JiaoYuzhen YeHaixu TangPublished in: PLoS Comput. Biol. (2013)
Keyphrases
- probabilistic inference
- sequence analysis
- sequence data
- graphical models
- influence diagrams
- weighted model counting
- bayesian networks
- belief networks
- context specific independence
- efficient inference
- genomic sequences
- conditional probabilities
- message passing
- approximate inference
- bucket elimination
- hidden markov models
- exact inference
- bayesian belief networks
- protein sequences
- junction tree
- variable elimination
- elimination algorithm
- high throughput
- pairwise
- lower bound
- machine learning
- neural network