Performance Evaluation of Spark, Ray and MPI: A Case Study on Long Read Alignment Algorithm.
Kun RanYingbo CuiZihang WangShaoliang PengPublished in: ICA3PP (3) (2023)
Keyphrases
- preprocessing
- high accuracy
- expectation maximization
- experimental evaluation
- dynamic programming
- detection algorithm
- optimization algorithm
- case study
- segmentation algorithm
- cost function
- k means
- learning algorithm
- computational complexity
- theoretical analysis
- times faster
- matching algorithm
- np hard
- search space
- linear programming
- significant improvement
- optimal solution
- simulated annealing
- general purpose
- improved algorithm
- hardware implementation
- parallel implementation