SparseAssembler: de novo Assembly with the Sparse de Bruijn Graph
Chengxi YeZhanshan (Sam) MaCharles H. CannonMihai PopDouglas W. YuPublished in: CoRR (2011)
Keyphrases
- graph structure
- random walk
- sparse data
- graph model
- weighted graph
- high dimensional
- motif discovery
- human genome
- graph representation
- directed graph
- graph theory
- gaussian graphical models
- directed acyclic
- structured data
- bipartite graph
- graph mining
- sparse coding
- connected components
- sparse representation
- graphical models
- graph based algorithm
- pairwise
- dna sequences
- graph matching
- compressive sensing
- graph construction
- graph laplacian
- feature selection