ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files.
Konrad BüssowSteve HoffmannVolker SievertPublished in: BMC Bioinform. (2002)
Keyphrases
- protein sequences
- relational databases
- text files
- sequence databases
- computational biology
- genome sequences
- structured query language
- protein structure
- biological sequences
- secondary structure
- amino acids
- databases
- protein secondary structure
- amino acid sequences
- normal form
- database
- protein structure prediction
- protein classification
- sql queries
- relational model
- multiple sequence alignment
- sequence analysis
- object oriented
- sequence data
- sequence alignment
- functional dependencies
- protein function
- source code
- data structure
- dna sequences
- xml data
- database schema
- case study
- data storage