MoD Tools: regulatory motif discovery in nucleotide sequences from co-regulated or homologous genes.
Giulio PavesiPaolo MereghettiFederico ZambelliMarco StefaniGiancarlo MauriGraziano PesolePublished in: Nucleic Acids Res. (2006)
Keyphrases
- motif discovery
- dna sequences
- dna binding
- transcription factors
- genome scale
- binding sites
- gene expression
- gene regulation
- regulatory networks
- saccharomyces cerevisiae
- transcription factor binding sites
- sequence data
- genomic sequences
- biological sequences
- biological processes
- gene expression data
- microarray
- pattern discovery
- sequence alignment
- cell cycle
- signaling pathways
- component analysis
- databases
- systems biology
- molecular biology
- data mining tasks
- statistical analysis