PlantPAN3.0: a new and updated resource for reconstructing transcriptional regulatory networks from ChIP-seq experiments in plants.
Chi-Nga ChowTzong-Yi LeeYu-Cheng HungGuan-Zhen LiKuan-Chieh TsengYa-Hsin LiuPo-Li KuoHan-Qin ZhengWen-Chi ChangPublished in: Nucleic Acids Res. (2019)
Keyphrases
- regulatory networks
- transcription factors
- binding sites
- gene expression
- microarray
- component analysis
- gene regulation
- dna sequences
- genome wide
- computational biology
- systems biology
- gene regulatory networks
- gene expression data
- high throughput
- co occurrence
- biological processes
- dna binding
- biological systems
- biological data
- motif discovery
- microarray data
- transcription factor binding sites
- protein protein interactions
- highly correlated
- biological networks
- biomedical literature
- high precision
- gene selection
- factor analysis
- reverse engineering
- gene sets
- biclustering algorithms
- high dimensionality
- statistical analysis