Heuristic Bayesian Segmentation for Discovery of Coexpressed Genes within Genomic Regions.
Petri PehkonenGarry WongPetri TörönenPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2010)
Keyphrases
- transcription factor binding sites
- protein coding regions
- image regions
- segmentation algorithm
- homogeneous regions
- genomic data
- region merging
- segmented images
- segmentation scheme
- gene expression
- image segmentation
- region segmentation
- segmented regions
- region growing
- segmentation method
- genomic sequences
- optimal solution
- dna binding
- dna sequences
- automatically segmented
- genome scale
- medical images
- level set
- gene prediction
- piecewise constant
- copy number
- region boundaries
- initial segmentation
- figure ground
- foreground and background
- comparative genomics
- high throughput
- gene expression data
- coding regions
- high throughput sequencing
- watershed transform
- evolutionary history
- graph cuts
- gene ontology
- binding sites
- bayesian inference
- object segmentation