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TE-greedy-nester: structure-based detection of LTR retrotransposons and their nesting.

Matej LexaPavel JedlickaIvan VanatMichal CervenanskýEduard Kejnovský
Published in: Bioinform. (2020)
Keyphrases
  • feature selection
  • detection algorithm
  • dna sequences
  • variable length
  • greedy algorithm
  • tandem repeats
  • machine learning
  • data structure
  • search algorithm
  • dynamic programming
  • text mining
  • long range
  • approximate matching