An Efficient Algorithm for Finding All Pairs k-Mismatch Maximal Common Substrings.
Sharma V. ThankachanSriram P. ChockalingamSrinivas AluruPublished in: ISBRA (2016)
Keyphrases
- learning algorithm
- detection algorithm
- improved algorithm
- computationally efficient
- worst case
- computational complexity
- k means
- cost function
- computational cost
- times faster
- matching algorithm
- optimization algorithm
- simulated annealing
- dynamic programming
- np hard
- preprocessing
- optimal solution
- objective function
- similarity measure
- data sets
- probabilistic model
- experimental evaluation
- particle swarm optimization
- multi objective
- recognition algorithm
- highly efficient
- method finds