Scalable genome scaffolding using integer linear programming.
James LindsayHamed SalootiAlexander ZelikovskyIon I. MandoiuPublished in: BCB (2012)
Keyphrases
- integer programming
- efficient solutions
- integer linear programming
- column generation
- cutting plane
- bicriteria
- global constraints
- linear programming
- optimal solution
- linear inequalities
- collaborative learning
- exact solution
- sequence data
- human genome
- symmetry breaking
- learning environment
- pseudo boolean
- genetic algorithm
- perfect phylogeny