miRTex: A Text Mining System for miRNA-Gene Relation Extraction.
Gang LiKaren E. RossCecilia N. ArighiYifan PengCathy H. WuK. Vijay-ShankerPublished in: PLoS Comput. Biol. (2015)
Keyphrases
- relation extraction
- text mining
- biomedical literature
- information extraction
- gene function
- gene expression
- named entities
- regulatory networks
- gene ontology
- automatic extraction
- biological processes
- microarray
- named entity recognition
- natural language processing
- gene regulation
- gene expression data
- text documents
- gene sets
- information retrieval
- text classification
- semantic features
- document clustering
- machine learning
- question answering
- data mining
- gene regulatory networks
- textual information
- microarray data
- biological knowledge
- semantic similarity
- semantic relations
- domain specific
- gene expression profiles
- binding sites
- knowledge discovery
- secondary structure
- parse tree
- genome wide
- natural language
- transcription factors
- data analysis
- systems biology
- co occurrence
- protein protein interactions
- computational methods
- dimensionality reduction
- keywords
- knowledge base
- gene networks
- feature selection
- high throughput