Protein Structure Prediction with Stochastic Optimization Methods: Folding and Misfolding the Villin Headpiece.
Thomas HergesAlexander SchugWolfgang WenzelPublished in: ICCSA (3) (2004)
Keyphrases
- protein structure prediction
- optimization methods
- stochastic methods
- stage stochastic programs
- protein sequences
- protein folding
- protein structure
- optimization problems
- graph theory
- drug design
- protein homology
- optimization method
- protein fold recognition
- optimization approaches
- computational biology
- simulated annealing
- amino acids
- coarse grained
- global convergence
- amino acid sequences
- protein function
- quasi newton
- direct optimization
- efficient optimization
- bayesian network models
- co occurrence
- secondary structure