Repeated-annealing sampling combined with multicanonical algorithm for conformational sampling of bio-molecules.
Narutoshi KamiyaJunichi HigoPublished in: J. Comput. Chem. (2001)
Keyphrases
- monte carlo
- sampling algorithm
- theoretical analysis
- preprocessing
- experimental evaluation
- computational cost
- simulated annealing
- improved algorithm
- times faster
- cost function
- detection algorithm
- input data
- dynamic programming
- optimal solution
- learning algorithm
- recognition algorithm
- classification algorithm
- computationally efficient
- expectation maximization
- particle swarm optimization
- significant improvement
- objective function
- optimization algorithm
- parameter estimation
- tree structure
- data sets
- matching algorithm
- markov chain monte carlo
- similarity measure
- sampling methods
- sampling strategy