AL2CO: calculation of positional conservation in a protein sequence alignment.
Jimin PeiNick V. GrishinPublished in: Bioinform. (2001)
Keyphrases
- sequence alignment
- pairwise
- amino acids
- protein sequences
- dynamic programming
- multiple sequence alignment
- multiple alignment
- gpu accelerated
- protein structure
- binding sites
- comparative genomics
- protein structure prediction
- phylogenetic analysis
- data sets
- protein classification
- sequence databases
- learning algorithm
- machine learning