Assessing next-generation sequencing-based computational methods for predicting transcriptional regulators with query gene sets.
Zeyu LuXue XiaoQiang ZhengXinlei WangLin XuPublished in: Briefings Bioinform. (2024)
Keyphrases
- computational methods
- microarray data
- transcription factors
- gene sets
- protein protein interactions
- gene ontology
- transcriptional regulation
- computational tools
- biological processes
- statistical methods
- microarray
- computational approaches
- data sources
- gene expression
- dna sequences
- genome wide
- computational biology
- saccharomyces cerevisiae
- binding sites
- data sets
- co occurrence
- machine learning
- protein interaction
- cluster analysis
- high precision
- regulatory networks
- statistical model
- protein function
- high dimensional