Maximum Entropy Weighting of Aligned Sequences of Proteins or DNA.
Anders KroghGraeme J. MitchisonPublished in: ISMB (1995)
Keyphrases
- maximum entropy
- sequence analysis
- sequence databases
- protein sequences
- biological sequences
- maximum entropy principle
- sequence data
- genome sequences
- sequence similarity
- amino acid sequences
- rna sequences
- gel electrophoresis
- markov models
- principle of maximum entropy
- protein structure
- computational biology
- transformation based learning
- coding regions
- hidden markov models
- secondary structure
- amino acids
- sequential patterns
- minimum cross entropy
- sequence alignment
- dna sequences
- phylogenetic trees
- maximum entropy model
- iterative scaling
- physicochemical properties
- dna binding
- conditional random fields
- class conditional
- generative model
- higher order
- bregman divergences
- information extraction
- pairwise