Algorithm-Hardware Co-design for BQSR Acceleration in Genome Analysis ToolKit.
Michael LoZhenman FangJie WangPeipei ZhouMau-Chung Frank ChangJason CongPublished in: FCCM (2020)
Keyphrases
- learning algorithm
- improved algorithm
- high accuracy
- detection algorithm
- np hard
- computational complexity
- dynamic programming
- convergence rate
- times faster
- search space
- experimental evaluation
- particle swarm optimization
- clustering method
- expectation maximization
- computationally efficient
- k means
- hardware and software
- data acquisition
- tree structure
- probabilistic model
- gene expression programming
- optimization algorithm
- theoretical analysis
- real time
- cost function
- significant improvement
- preprocessing
- data analysis
- optimal solution
- objective function
- neural network