Stoichiometric Representation of Gene-Protein-Reaction Associations Leverages Constraint-Based Analysis from Reaction to Gene-Level Phenotype Prediction.
Daniel MachadoMarkus J. HerrgårdIsabel RochaPublished in: PLoS Comput. Biol. (2016)
Keyphrases
- gene expression
- wet lab
- gene prediction
- protein interaction
- biological knowledge
- biologically meaningful
- gene expression data
- escherichia coli
- chemical reaction
- genome annotation
- protein protein interactions
- gene ontology
- genomic sequences
- microarray
- biological entities
- regulatory networks
- prediction accuracy
- sequence alignment
- biological networks
- gene regulatory networks
- homo sapiens