High-Order Convolutional Neural Network Architecture for Predicting DNA-Protein Binding Sites.
Qinhu ZhangLin ZhuDe-Shuang HuangPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2019)
Keyphrases
- saccharomyces cerevisiae
- regulatory networks
- high order
- binding sites
- transcription factors
- convolutional neural network
- gene expression
- transcriptional regulation
- drosophila melanogaster
- dna binding
- motif discovery
- dna sequences
- higher order
- sequence data
- microarray
- statistical significance
- gene expression data
- pairwise
- sigma delta
- sequence alignment
- biological sequences
- protein protein
- transcription factor binding sites
- face detection
- biological processes
- protein interaction
- cis regulatory
- regulatory elements
- protein protein interactions
- protein families
- genome sequences
- sequence analysis
- predicting protein
- genomic data
- coding regions
- neural network
- genome wide
- machine learning