Modeling Transcription Factor Binding Sites with Gibbs Sampling and Minimum Description Length Encoding.
Jonathan SchugG. Christian OvertonPublished in: ISMB (1997)
Keyphrases
- minimum description length
- gibbs sampling
- information theoretic
- markov chain
- mdl principle
- parameter estimation
- transcription factor binding sites
- approximate inference
- latent dirichlet allocation
- exact inference
- markov chain monte carlo
- topic models
- expectation maximization
- binding sites
- dynamic bayesian networks
- em algorithm
- similarity measure
- learning algorithm
- dna sequences
- graphical models