CHIPIN: ChIP-seq inter-sample normalization based on signal invariance across transcriptionally constant genes.
Lélia PolitGwenneg KerdivelSebastian GregoricchioMichela EspositoChristel GuilloufValentina BoevaPublished in: BMC Bioinform. (2021)
Keyphrases
- high throughput sequencing
- transcription factors
- gene expression
- chip seq
- microarray data
- dna binding
- genome wide
- microarray
- gene expression data
- biclustering algorithms
- gene sets
- gene regulation
- experimental conditions
- regulatory networks
- biological processes
- binding sites
- non stationary
- component analysis
- gene ontology
- data sets
- gene regulatory networks
- computational biology
- statistically significant
- co occurrence