How well do RNA-Seq differential gene expression tools perform in a complex eukaryote? A case study in Arabidopsis thaliana.
Kimon FroussiosNick J. SchurchKatarzyna MackinnonMarek GierlinskiCéline DucGordon G. SimpsonGeoffrey J. BartonPublished in: Bioinform. (2019)
Keyphrases
- gene expression
- rna seq
- microarray
- gene expression data
- dna binding
- microarray data
- high throughput
- gene regulation
- biological processes
- complex systems
- binding sites
- alternative splicing
- gene expression profiles
- transcription factors
- high dimensional
- microarray datasets
- regulatory networks
- gene selection
- feature selection
- high dimensionality