GalaxyPepDock: a protein-peptide docking tool based on interaction similarity and energy optimization.
Hasup LeeLim HeoMyeong Sup LeeChaok SeokPublished in: Nucleic Acids Res. (2015)
Keyphrases
- amino acids
- mass spectrometry
- tandem mass spectra
- mass spectra
- optimization algorithm
- protein sequences
- protein structure alignment
- protein interaction
- energy consumption
- similarity measure
- tandem mass spectrometry
- energy minimization
- protein classification
- global optimization
- protein structure
- human computer interaction
- high throughput
- sequence similarity
- multi objective
- distance function
- wireless sensor networks
- dead end
- distance measure
- distribution network
- protein structure prediction
- user interaction
- similarity measurement
- similarity search
- similarity function