ProSampler: an ultrafast and accurate motif finder in large ChIP-seq datasets for combinatory motif discovery.
Yang LiPengyu NiShaoqiang ZhangGuojun LiZhengchang SuPublished in: Bioinform. (2019)
Keyphrases
- motif discovery
- transcription factors
- data mining tasks
- binding sites
- dna sequences
- data mining algorithms
- motif finding
- pattern discovery
- motif discovery algorithm
- biological sequences
- gene expression
- dna binding
- computational biology
- microarray
- genome wide
- multiobjective optimization
- component analysis
- biological networks
- data mining
- data mining applications
- high throughput
- systems biology
- sequence data
- transcription factor binding sites
- natural language processing
- highly correlated