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Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA.

Yongchao LiuBertil SchmidtDouglas L. Maskell
Published in: IPDPS (2009)
Keyphrases
  • multiple sequence alignments
  • phylogenetic trees
  • tree structure
  • protein sequences
  • shared memory
  • protein protein interactions
  • social networks
  • nearest neighbor
  • fine grained