Argo_CUDA: Exhaustive GPU based approach for motif discovery in large DNA datasets.
Oleg V. VishnevskyAndrey V. BocharnikovNikolay A. KolchanovPublished in: J. Bioinform. Comput. Biol. (2018)
Keyphrases
- motif discovery
- dna sequences
- data mining tasks
- biological sequences
- binding sites
- data mining algorithms
- parallel implementation
- motif finding
- gpu implementation
- sequence analysis
- graphics processors
- parallel computing
- pattern discovery
- computational biology
- multiobjective optimization
- sequence data
- compute unified device architecture
- machine learning
- molecular biology
- biological data
- gene expression
- knowledge discovery
- data analysis
- data mining
- database