Fast calculation of pairwise mutual information for gene regulatory network reconstruction.
Peng QiuAndrew J. GentlesSylvia K. PlevritisPublished in: Comput. Methods Programs Biomed. (2009)
Keyphrases
- mutual information
- gene regulatory networks
- pairwise
- similarity measure
- reverse engineering
- image registration
- gene expression data
- information theoretic
- network model
- gene networks
- feature selection
- undirected graphical models
- bayesian inference
- biological data
- dynamic bayesian networks
- higher order
- semi supervised
- structure learning
- markov random field
- data sets
- gene expression
- metropolis hastings algorithm
- artificial intelligence
- data mining
- neural network