ProtDCal: A program to compute general-purpose-numerical descriptors for sequences and 3D-structures of proteins.
Yasser B. Ruiz-BlancoWaldo PazJames GreenYovani Marrero-PoncePublished in: BMC Bioinform. (2015)
Keyphrases
- general purpose
- sequence analysis
- special purpose
- sequence similarity
- hidden markov models
- multiple sequence alignments
- protein sequences
- sequence databases
- tree structures
- domain specific
- protein structure
- application specific
- chemical compounds
- sequential patterns
- tightly coupled
- protein function
- protein families
- multiple sequence alignment
- structural features
- computational methods
- amino acids
- shape descriptors
- protein protein interaction networks
- structural motifs
- physicochemical properties
- multiscale
- protein structure prediction
- phylogenetic trees
- sequence alignment
- protein protein interactions
- programming language
- image retrieval