Improving peptide-protein docking with AlphaFold-Multimer using forced sampling.
Isak Johansson-ÅkheBjörn WallnerPublished in: Frontiers Bioinform. (2022)
Keyphrases
- amino acids
- tandem mass spectra
- mass spectrometry
- mass spectra
- protein sequences
- tandem mass spectrometry
- high throughput
- protein classification
- random sampling
- protein function
- mass spectrometry data
- ms ms
- protein structure
- protein structure prediction
- secondary structure
- parameter space
- sampling strategy
- mhc class ii
- dead end
- machine learning
- sampled data
- protein folding
- drug discovery
- sampling algorithm
- sample size
- similarity search
- three dimensional
- genetic algorithm