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Identification of consensus RNA secondary structures using suffix arrays.
Mohammad Anwar
Truong Nguyen
Marcel Turcotte
Published in:
BMC Bioinform. (2006)
Keyphrases
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suffix array
rna secondary structures
space efficient
suffix tree
data structure
data compression
secondary structure
similarity measurement
pattern matching
rna sequences
string matching
inverted file
feature space
hidden markov models