Flexible structural protein alignment by a sequence of local transformations.
Jairo RochaJoan SeguraRichard C. WilsonSwagata DasguptaPublished in: Bioinform. (2009)
Keyphrases
- sequence alignment
- multiple sequence alignment
- psi blast
- protein structural
- rna sequences
- protein sequences
- rna secondary structures
- sequence similarity
- multiple sequence alignments
- sequence analysis
- multiple alignment
- secondary structure
- amino acids
- protein backbone
- remote homology detection
- protein structure alignment
- pairwise
- protein structure
- structural information
- statistical significance
- protein secondary structure prediction
- protein structure prediction
- biological sequences
- tertiary structure
- genetic algorithm
- contact map
- protein classification
- computational biology
- protein function
- molecular biology
- computational methods
- dynamic programming