DNAlignTT: Pairwise DNA alignment with sequence specific transition-transversion ratio.

Ankit Agrawal Xiaoqiu Huang

Published in: EIT (2008)

Keyphrases

pairwise
sequence alignment
global alignment
rna sequences
sequence analysis
similarity measure
high level
biological sequences
dna sequences
similarity function
higher order
image segmentation
loss function
markov random field
dna computing
reinforcement learning
multiple sequence alignments