Accurate prediction of RNA-binding protein residues with two discriminative structural descriptors.
Meijian SunXia WangChuanxin ZouZenghui HeWei LiuHonglin LiPublished in: BMC Bioinform. (2016)
Keyphrases
- experimentally determined
- secondary structure
- contact map
- protein structure
- protein sequences
- amino acid sequences
- amino acids
- protein structure prediction
- protein chains
- protein tertiary structure
- rna sequences
- solvent accessibility
- contact maps
- protein secondary structure
- tertiary structure
- predicting protein
- protein folding
- rna secondary structure prediction
- sequence similarity
- protein function
- structural motifs
- highly discriminative
- structural features
- protein structural
- protein structure alignment
- protein protein
- multiple sequence alignments
- sequence analysis
- nucleotide sequences
- protein protein interactions
- computational methods
- molecular biology
- computational biology
- subcellular localization
- prediction accuracy
- physicochemical properties
- cis regulatory
- rna secondary structures
- drug design
- coarse grained
- dna binding
- multiple alignment
- genome wide
- binding peptides
- multiple sequence alignment
- amino acid composition
- sequence alignment
- remote homology detection
- feature extraction
- mhc class ii