Structure-Guided Protein Transition Modeling with a Probabilistic Roadmap Algorithm.
Tatiana MaximovaErion PlakuAmarda ShehuPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2018)
Keyphrases
- experimental evaluation
- times faster
- detection algorithm
- k means
- preprocessing
- computational complexity
- optimization algorithm
- optimal solution
- lattice structure
- convergence rate
- np hard
- tree structure
- computational cost
- clustering method
- context free parsing
- high accuracy
- learning algorithm
- objective function
- cost function
- pairwise
- lower bound
- worst case
- protein sequences
- protein structure
- matching algorithm
- expectation maximization
- linear programming
- probabilistic model
- significant improvement
- similarity measure