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CUDAMPF: a multi-tiered parallel framework for accelerating protein sequence search in HMMER on CUDA-enabled GPU.

Hanyu JiangNarayan Ganesan
Published in: BMC Bioinform. (2016)
Keyphrases
  • protein sequences
  • parallel implementation
  • parallel computing
  • parallel computation
  • parallel programming
  • multi tiered
  • general purpose
  • parallel processing
  • shared memory
  • coarse grained