SPDesign: protein sequence designer based on structural sequence profile using ultrafast shape recognition.
Hui WangDong LiuKailong ZhaoYajun WangGuijun ZhangPublished in: Briefings Bioinform. (2024)
Keyphrases
- shape recognition
- protein sequences
- protein structural
- sequence analysis
- rna sequences
- biological sequences
- protein structure
- shape analysis
- sequence alignment
- amino acids
- genome sequences
- fourier descriptors
- experimentally determined
- secondary structure
- protein function
- object recognition
- dissimilarity measure
- psi blast
- string matching
- multiple sequence alignments
- protein structure prediction
- protein backbone
- protein folding
- protein families
- machine learning
- structural motifs
- sequence data