Simultaneous Sequence Alignment and Tree Construction Using Hidden Markov Models.

Robert C. Edgar Kimmen Sjölander

Published in: Pacific Symposium on Biocomputing (2003)

Keyphrases

sequence alignment
tree construction
decision trees
pairwise
protein sequences
suffix tree
r tree
dynamic programming
gpu accelerated
phylogenetic analysis
amino acids
protein structure
database
neural network
database systems
dimensionality reduction