Protein sequence alignment and structural disorder: a substitution matrix for an extended alphabet.
Uros MidicA. Keith DunkerZoran ObradovicPublished in: KDD Workshop on Statistical and Relational Learning in Bioinformatics (2009)
Keyphrases
- protein sequences
- rna sequences
- multiple alignment
- protein structural
- multiple sequence alignment
- sequence alignment
- experimentally determined
- computational biology
- secondary structure
- multiple sequence alignments
- protein structure
- protein backbone
- remote homology detection
- biological sequences
- amino acids
- protein function
- pattern matching
- protein classification
- protein folding
- amino acid sequences
- protein structure prediction
- structural motifs
- protein structure and function
- psi blast
- sequence analysis
- protein secondary structure
- disordered regions
- amino acid composition
- protein protein