Segmentation and tracking of Pseudomonas aeruginosa for cell dynamics analysis in time-lapse images.
Jianxu ChenYiqing CaiChen WeiLin YangMark S. AlberDanny Ziyi ChenPublished in: ISBI (2016)
Keyphrases
- cell segmentation
- microscopy images
- image analysis
- microscopic images
- phase contrast
- segmentation method
- quantitative analysis
- segmentation algorithm
- test images
- microscope images
- segmented images
- fluorescence microscopy images
- three dimensional
- cell nuclei
- accurate segmentation
- live cell imaging
- edge detection
- segmentation errors
- image data
- image segmentation
- ground truth
- image features
- accurate localization
- pixel level
- image regions
- input image
- living cells
- adaptive thresholding
- multiple objects
- partial occlusion
- fully automatic
- phase contrast images
- grey level
- automated analysis
- clinical applications
- image retrieval
- low contrast
- particle filter
- bounding box
- white blood
- phase contrast microscopy
- image registration
- level set
- cell nucleus
- region growing
- deformable templates
- text detection
- complex background
- cancer cells
- segmentation accuracy
- image segments
- watershed segmentation