Using internal and collective variables in Monte Carlo simulations of nucleic acid structures: Chain breakage/closure algorithm and associated Jacobians.
Heinz SklenarDaniel WüstnerRemo RohsPublished in: J. Comput. Chem. (2006)
Keyphrases
- detection algorithm
- monte carlo simulation
- learning algorithm
- optimization algorithm
- experimental evaluation
- times faster
- monte carlo
- segmentation algorithm
- relevant variables
- closed form
- matching algorithm
- ant colony optimization
- computational complexity
- optimal solution
- objective function
- computational cost
- dynamic programming
- k means
- search space
- preprocessing
- linear programming
- np hard
- convergence rate
- recognition algorithm