Efficient Inference of Haplotypes from Genotypes on a Pedigree with Mutations and Missing Alleles (Extented Abstract).
Wei-Bung WangTao JiangPublished in: CPM (2009)
Keyphrases
- efficient inference
- single nucleotide polymorphisms
- missing data
- association studies
- sequence data
- probabilistic inference
- fully connected
- genome wide
- conditional random fields
- high throughput
- complex diseases
- markov random field
- hidden variables
- human genome
- haplotype inference
- computational approaches
- dna sequences
- genetic variation
- human pose estimation
- missing values
- structured prediction
- graph structure
- linear models
- approximate inference
- exact inference
- markov networks
- factor graphs
- genome wide association studies
- graphical models
- pose estimation
- message passing
- highly correlated
- variable selection
- incomplete data