Incorporating significant amino acid pairs and protein domains to predict RNA splicing-related proteins with functional roles.
Justin Bo-Kai HsuKai-Yao HuangJulia Tzu-Ya WengChien-Hsun HuangTzong-Yi LeePublished in: J. Comput. Aided Mol. Des. (2014)
Keyphrases
- amino acids
- secondary structure
- predicting protein
- protein sequences
- experimentally determined
- amino acid sequences
- protein function
- secondary structure prediction
- protein structure
- physicochemical properties
- functional roles
- protein folding
- amino acid residues
- protein structure prediction
- tertiary structure
- sequence alignment
- rna structures
- pairwise
- psi blast
- structural motifs
- physico chemical
- protein protein
- sequence similarity
- rna secondary structures
- contact map
- rna sequences
- computational methods
- protein interaction
- contact maps
- sequence analysis
- protein families
- protein classification
- interaction networks
- multiple sequence alignment
- string kernels
- coarse grained
- computational biology
- high precision