Cell4D: a general purpose spatial stochastic simulator for cellular pathways.
Donny ChanGraham L. CromarBilly TajJohn ParkinsonPublished in: BMC Bioinform. (2024)
Keyphrases
- general purpose
- signal transduction
- molecular interactions
- spatial information
- special purpose
- signal transduction pathways
- biological systems
- spatio temporal
- domain specific
- grid cells
- living cells
- programming language
- cellular processes
- molecular level
- spatial data
- stochastic optimization
- spatial and temporal
- spatial relationships
- cellular systems
- application specific
- highly complex
- mathematical modeling
- biological pathways
- phase contrast microscopy
- signaling pathways
- spatial features
- cellular automata
- space time
- spatial distribution
- simulation model
- spatial relations
- spatial databases
- image analysis