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Constructing Suffix Array of Next-Generation Sequencing upon In-Memory Lookup Cloud and MapReduce.

Li-Chen LiuMeng-Huang LeeShin-Hung ChangRay-I ChangYu-Jung ChangJan-Ming Ho
Published in: IEEE BigData (2019)
Keyphrases
  • suffix array
  • cloud computing
  • data structure
  • space efficient
  • suffix tree
  • string matching
  • data compression
  • map reduce
  • data analytics
  • data management
  • similarity measurement
  • pattern matching
  • main memory
  • tree structure