Optimal word sizes for dissimilarity measures and estimation of the degree of dissimilarity between DNA sequences.
Tiee-Jian WuYing-Hsueh HuangLung-An LiPublished in: Bioinform. (2005)
Keyphrases
- dissimilarity measure
- dna sequences
- dissimilarity representation
- similarity measure
- dna sequencing
- dna computing
- tandem repeats
- human genome
- pattern recognition
- motif discovery
- clustering method
- distance measure
- sequence patterns
- feature space
- biological sequences
- dynamic programming
- genomic sequences
- coding regions
- binding sites
- neural network
- visual similarity
- problems in computational biology
- transcription factors
- structural pattern recognition
- edit distance
- distance function
- computer vision