A Graph-Theoretical Approach for Motif Discovery in Protein Sequences.

Elena Czeizler Tommi Hirvola Kalle Karhu

Published in: IEEE ACM Trans. Comput. Biol. Bioinform. (2017)

Keyphrases

graph theoretical
protein sequences
motif discovery
biological sequences
computational biology
graph theory

sequence databases
motif finding
amino acids
molecular biology
protein structure
multiple sequence alignment

secondary structure
sequence analysis
pattern discovery
dna sequences
multiple alignment
multiobjective optimization

transcription factors
sequence alignment
genetic algorithm
white matter
data mining tasks