Optimizing Spaced $k$-mer Neighbors for Efficient Filtration in Protein Similarity Search.
Weiming LiBin MaKaizhong ZhangPublished in: IEEE ACM Trans. Comput. Biol. Bioinform. (2014)
Keyphrases
- similarity search
- efficient search
- indexing structure
- efficient similarity search
- mass spectra
- uncertain trajectories
- distance function
- metric space
- distance computation
- efficient indexing
- high dimensional
- query processing
- sequence databases
- indexing techniques
- similarity measure
- similarity searching
- high dimensional data
- similarity retrieval
- multimedia databases
- similarity queries
- space partitioning
- knn
- triangle inequality
- cross view
- hash functions
- binary codes
- databases
- nearest neighbor
- protein structure
- r tree
- index structure
- multi dimensional
- content based multimedia retrieval