Using Ontology Fingerprints to Disambiguate Gene Name Entities in the Biomedical Literature.
Guocai ChenJieyi ZhaoTrevor CohenCui TaoJingchun SunHua XuElmer V. BernstamJia ZengAmber M. JohnsonVijaykumar HollaAnn BalleyFunda Meric-BernstamW. Jim ZhengPublished in: ICBO (2014)
Keyphrases
- biomedical literature
- semantic relationships
- text mining
- biological entities
- domain ontology
- biological processes
- wordnet
- semantic information
- biomedical ontologies
- automatic extraction
- co occurrence
- data sources
- semantic similarity
- keywords
- named entities
- protein protein interaction networks
- domain knowledge
- semantic relations
- word sense disambiguation
- gene ontology terms
- semantic features
- protein interaction
- medical literature
- data sets
- protein protein interactions
- domain specific
- key concepts
- semantic web
- gene function
- natural language processing
- natural language
- semi automatic